Total number of individuals: 777

Number of individuals with 0 missing data: 668
Number of individuals with 1 missing data: 68
Number of individuals with 2 missing data: 41



Allele frequency at locus 1 (G/A) 0.76048 / 0.23952	p(HWE) = 0.227897
Allele frequency at locus 2 (C/T) 0.59880 / 0.40120	p(HWE) = 0.293616

Frequencies of Plausible Haplotype under Linkage Equilibrium

Haplotype [0]	GC	0.455377
Haplotype [1]	GT	0.305102
Haplotype [2]	AC	0.143426
Haplotype [3]	AT	0.096095


After 2501 iterations burn at step 1500

Frequencies of Plausible Haplotypes under Linkage Disequilibrium

				Estimation	StError	T-Test

Haplotype [0] 	GC 0.447118	
Haplotype [1] 	GT 0.313361	0.014063	22.282011
Haplotype [2] 	AC 0.151684	0.011646	13.024323
Haplotype [3] 	AT 0.087837	0.009514	9.232228





			LD MATRIX

		 -0.09	
			
		

			P-Value MATRIX

		 0.149	
			
		